bpass

Convert *.nd2 file to image sequence and apply bandpass filter to each image. Save this image sequence in a subfolder under the same folder as the *.nd2 file with corresponding name as the *.nd2 file name.

Syntax

python bpass.py nd2Dir bpassLow bpassHigh

• nd2Dir – full directory of *.nd2 file

• bpassLow – lower bound of wavelength

• bpassHigh – upper bound of wavelength

Edit

• Nov 15, 2022 – Modify docstring.

• Jan 05, 2023 – Adapt myimagelib import style.

• Feb 08, 2023 – Rewrite in function wrapper form, to make autodoc work properly. (autodoc import the script and execute it, so anything outside if __name__=="__main__" will be executed, causing problems)